- Predicted Gene MLOC_11287
MLOC_11287 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 58.4194 | 64.8503 | 62.6943 | 55.8796 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 63.4534 | 60.5322 | 54.677 | 47.2124 |
| INF1 | Young developing inflorescences (5mm) | 103.005 | 116.13 | 116.159 | 80.051 |
| INF2 | Developing inflorescences (1-1.5 cm) | 100.084 | 106.772 | 99.2066 | 100.23 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 70.5169 | 79.7149 | 70.3331 | 84.781 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 80.4071 | 69.6566 | 71.1398 | 230.72 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 59.5315 | 57.6631 | 63.659 | 51.0304 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 23.189 | 20.3146 | 24.0096 | 42.9718 |
CDS Structure of MLOC_11287
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_11287.2
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os05g45420.3 |
-2 |
0.0 |
817 |
408/448 (91%) |
13105.m04826 protein CAMK_KIN1/SNF1/Nim1_like_AMPKh.3 - CAMK includes calcium/calmodulin depedent protein kinases, expressed |
| TAIR PP10 |
AT3G01090.3 |
-2 |
0.0 |
712 |
353/450 (78%) |
| Symbols: AKIN10, KIN10 | SNF1 kinase homolog 10 | chr3:31437-33977 REVERSE LENGTH=512 |