MLOC_11286 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.2941460.3783560.3620620.423785
LEAShoots from the seedlings (10 cm shoot stage)2.419774.793929.534595.60561
INF1Young developing inflorescences (5mm)0000
INF2Developing inflorescences (1-1.5 cm)0000
ROORoots from the seedlings (10 cm shoot stage)1.974961.977832.496772.80979
NODDeveloping tillers at six leaf stage, 3rd internode0.5950920.4680540.3509141.54421
CAR5Developing grain, bracts removed (5 DPA)0.03813580.01796900.0304992
CAR15Developing grain, bracts removed (15 DPA)0.6291620.8817820.4795561.93533



CDS Structure of MLOC_11286






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_11286.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK362315NoneNoneNoneNone
MLOC_11286.1CUST_1006_PI427708080AvailableAvailablecontig_1560752 (Not mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os05g45410.1 +2 1e-154 459 260/458 (57%) 13105.m04823 protein HSF-type DNA-binding domain containing protein, expressed
TAIR PP10 AT4G18880.1 +2 3e-74 248 160/440 (36%) | Symbols: AT-HSFA4A, HSF A4A | heat shock transcription factor A4A | chr4:10347769-10349051 REVERSE LENGTH=401