MLOC_11272 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains9.1525811.2519.9750110.3588
LEAShoots from the seedlings (10 cm shoot stage)7.174343.351093.578314.17354
INF1Young developing inflorescences (5mm)51.330553.573458.571244.4201
INF2Developing inflorescences (1-1.5 cm)42.096654.277944.925751.355
ROORoots from the seedlings (10 cm shoot stage)2.687927.877467.192468.56142
NODDeveloping tillers at six leaf stage, 3rd internode3.260123.98693.022412.8337
CAR5Developing grain, bracts removed (5 DPA)4.512424.199444.311724.11832
CAR15Developing grain, bracts removed (15 DPA)0.9805570.2429171.277441.69324



CDS Structure of MLOC_11272






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_11272.3
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_11272.3CUST_1745_PI427708083AvailableAvailablecontig_1560734 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os06g39640.1 +1 0.0 631 323/342 (94%) 13106.m04111 protein PINHEAD, putative, expressed
TAIR PP10 AT5G43810.2 +1 0.0 598 303/342 (89%) | Symbols: ZLL | Stabilizer of iron transporter SufD / Polynucleotidyl transferase | chr5:17611939-17616562 FORWARD LENGTH=988