MLOC_11265 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains16.278721.158622.592915.2493
LEAShoots from the seedlings (10 cm shoot stage)15.81678.653088.932558.30019
INF1Young developing inflorescences (5mm)53.772854.259453.787534.424
INF2Developing inflorescences (1-1.5 cm)61.15349.582448.570847.9018
ROORoots from the seedlings (10 cm shoot stage)15.820617.053719.871715.5464
NODDeveloping tillers at six leaf stage, 3rd internode5.363383.3246613.675513.7068
CAR5Developing grain, bracts removed (5 DPA)16.588818.654320.605313.4329
CAR15Developing grain, bracts removed (15 DPA)8.9684810.01757.0083115.0049



CDS Structure of MLOC_11265






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_11265.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_11265.2CUST_8761_PI427708080AvailableAvailablecontig_1560722 (Not mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os01g48210.1 +2 1e-54 191 96/110 (87%) 13101.m04994 protein PAP/25A associated domain containing protein, putative, expressed
TAIR PP10 AT5G53770.1 +2 1e-37 141 72/110 (65%) Nucleotidyltransferase family protein | chr5:21826733-21829858 FORWARD LENGTH=530