- Predicted Gene MLOC_11262
MLOC_11262 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 4.16733 | 18.9898 | 12.1982 | 17.261 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 44.1796 | 29.5861 | 17.9969 | 31.3139 |
| INF1 | Young developing inflorescences (5mm) | 1.77335 | 0.551135 | 0.759509 | 0.947228 |
| INF2 | Developing inflorescences (1-1.5 cm) | 2.80665 | 3.35304 | 2.88668 | 3.88804 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 30.8387 | 7.44971 | 12.7636 | 19.0905 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 34.7854 | 69.0423 | 24.5971 | 293.488 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 24.7905 | 22.4903 | 28.2744 | 28.555 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 15.9403 | 13.6232 | 13.3468 | 36.8901 |
CDS Structure of MLOC_11262
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_11262.3
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os02g03840.2 |
-3 |
0.0 |
1023 |
947/3112 (30%) |
13102.m12354 protein expressed protein |
| TAIR PP10 |
AT5G40450.1 |
-3 |
7e-68 |
257 |
651/3128 (21%) |
unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast, plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). | chr5:16184799-16195513 REVERSE LENGTH=2889 |