- Predicted Gene MLOC_11260
MLOC_11260 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 9.83202 | 17.9406 | 16.987 | 12.9737 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 17.2014 | 17.9963 | 18.2981 | 13.394 |
| INF1 | Young developing inflorescences (5mm) | 28.6726 | 28.8733 | 31.0331 | 20.5425 |
| INF2 | Developing inflorescences (1-1.5 cm) | 29.8087 | 36.2115 | 30.1471 | 29.7884 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 12.0967 | 16.5771 | 12.2963 | 15.7608 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 8.13618 | 8.37672 | 8.20864 | 24.1455 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 33.5432 | 32.1623 | 34.7391 | 26.285 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 19.0953 | 17.5237 | 15.5267 | 33.3722 |
CDS Structure of MLOC_11260
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_11260.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os03g52594.3 |
+1 |
0.0 |
693 |
420/625 (67%) |
13103.m05726 protein CCR4-NOT transcription factor, putative, expressed |
| TAIR PP10 |
AT5G59710.1 |
+1 |
2e-157 |
493 |
323/591 (55%) |
| Symbols: VIP2, AtVIP2 | VIRE2 interacting protein 2 | chr5:24058157-24061736 FORWARD LENGTH=614 |