MLOC_11257 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains4.489657.676628.224665.87028
LEAShoots from the seedlings (10 cm shoot stage)12.341110.159710.17248.33741
INF1Young developing inflorescences (5mm)10.48049.8157610.01847.22027
INF2Developing inflorescences (1-1.5 cm)17.279713.453215.424614.3844
ROORoots from the seedlings (10 cm shoot stage)5.603269.646077.635638.95162
NODDeveloping tillers at six leaf stage, 3rd internode9.6756212.56288.2773532.9087
CAR5Developing grain, bracts removed (5 DPA)11.959911.49510.99749.42628
CAR15Developing grain, bracts removed (15 DPA)6.845856.17416.8296312.5513



CDS Structure of MLOC_11257






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_11257.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_11257.1NoneAvailableAvailablecontig_1560709 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os01g65330.2 +1 8e-150 452 252/287 (88%) 13101.m07055 protein expressed protein
TAIR PP10 AT1G34320.1 +1 1e-112 360 204/283 (72%) Protein of unknown function (DUF668) | chr1:12520713-12524046 FORWARD LENGTH=657