MLOC_11207 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains2.094231.392731.611831.81198
LEAShoots from the seedlings (10 cm shoot stage)4.655520.8357941.044932.04072
INF1Young developing inflorescences (5mm)1.459461.121151.528481.25231
INF2Developing inflorescences (1-1.5 cm)4.818116.254624.565696.47458
ROORoots from the seedlings (10 cm shoot stage)0.6805660.9785220.5818111.28427
NODDeveloping tillers at six leaf stage, 3rd internode2.764683.445760.93887611.3355
CAR5Developing grain, bracts removed (5 DPA)0.3514390.5436750.4611410.511126
CAR15Developing grain, bracts removed (15 DPA)0.5893620.2697710.5442681.13791



CDS Structure of MLOC_11207






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_11207.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_11207.2CUST_8752_PI427708080AvailableAvailablecontig_1560617 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os04g47480.1 +3 2e-162 481 269/384 (70%) 13104.m04812 protein DUF630/DUF632 domains containing protein, putative, expressed
TAIR PP10 AT2G17110.1 +3 1e-82 271 143/283 (51%) Protein of unknown function (DUF630 and DUF632) | chr2:7443366-7445969 REVERSE LENGTH=733