MLOC_1120 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0000
LEAShoots from the seedlings (10 cm shoot stage)0000
INF1Young developing inflorescences (5mm)0000
INF2Developing inflorescences (1-1.5 cm)0000
ROORoots from the seedlings (10 cm shoot stage)00.20425600.849716
NODDeveloping tillers at six leaf stage, 3rd internode0000
CAR5Developing grain, bracts removed (5 DPA)125.286194.04298.9375123.836
CAR15Developing grain, bracts removed (15 DPA)0000



CDS Structure of MLOC_1120






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_1120.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_1120.1CUST_8750_PI427708080AvailableAvailablecontig_10957 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os03g31510.1 +2 9e-16 71 35/89 (39%) 13103.m03602 protein cysteine proteinase inhibitor 8 precursor, putative, expressed
TAIR PP10 AT5G47550.1 +2 9e-12 59 35/92 (38%) Cystatin/monellin superfamily protein | chr5:19286596-19286964 REVERSE LENGTH=122