MLOC_11185 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.12880.2822020.07637420.221202
LEAShoots from the seedlings (10 cm shoot stage)0.08926680.5117741.606180.733667
INF1Young developing inflorescences (5mm)0000
INF2Developing inflorescences (1-1.5 cm)0000
ROORoots from the seedlings (10 cm shoot stage)00.13210400.46363
NODDeveloping tillers at six leaf stage, 3rd internode0.03815920.1025111.424251.18691
CAR5Developing grain, bracts removed (5 DPA)0.060100100.1141960.128871
CAR15Developing grain, bracts removed (15 DPA)0.7649381.276561.249622.96085



CDS Structure of MLOC_11185






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_11185.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_11185.2CUST_1737_PI427708083AvailableAvailablecontig_1560583 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os03g55120.1 -2 3e-30 113 59/120 (49%) 13103.m05990 protein plastocyanin-like domain containing protein, putative, expressed
TAIR PP10 AT2G27035.1 -2 2e-15 72 43/101 (43%) | Symbols: ENODL20, AtENODL20 | early nodulin-like protein 20 | chr2:11535670-11536251 FORWARD LENGTH=163