MLOC_11175 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains23.000119.587816.936319.6825
LEAShoots from the seedlings (10 cm shoot stage)20.06720.066121.181716.9332
INF1Young developing inflorescences (5mm)14.094712.854912.847910.6679
INF2Developing inflorescences (1-1.5 cm)7.5203410.38487.3465610.2225
ROORoots from the seedlings (10 cm shoot stage)13.156810.662911.433613.3983
NODDeveloping tillers at six leaf stage, 3rd internode13.896116.379720.973554.2566
CAR5Developing grain, bracts removed (5 DPA)12.834115.042917.52616.151
CAR15Developing grain, bracts removed (15 DPA)4.409163.768133.99469.26114



CDS Structure of MLOC_11175






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_11175.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_11175.1CUST_11332_PI427708083AvailableAvailablecontig_1560561 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os12g18630.1 -2 1e-29 119 62/75 (83%) 13112.m01977 protein expressed protein
TAIR PP10 AT5G24690.1 -2 2e-12 69 38/69 (55%) Protein of unknown function (DUF3411) | chr5:8455783-8458513 REVERSE LENGTH=521