- Predicted Gene MLOC_11173
MLOC_11173 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_11173_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_11173_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
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EMB | 4-day embryos dissected from germinating grains | 0.899906 | 2.84565 | 1.75742 | 1.36899 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 4.3425 | 1.64508 | 1.44635 | 1.82979 |
INF1 | Young developing inflorescences (5mm) | 2.62918 | 1.92268 | 2.20254 | 1.37177 |
INF2 | Developing inflorescences (1-1.5 cm) | 1.9489 | 1.85688 | 3.028 | 1.21543 |
ROO | Roots from the seedlings (10 cm shoot stage) | 0.346488 | 1.31527 | 2.42587 | 1.01019 |
NOD | Developing tillers at six leaf stage, 3rd internode | 1.33499 | 1.42499 | 1.65504 | 5.46462 |
CAR5 | Developing grain, bracts removed (5 DPA) | 5.02174 | 3.77094 | 3.96477 | 2.0177 |
CAR15 | Developing grain, bracts removed (15 DPA) | 1.56938 | 0.99082 | 0.654472 | 1.75282 |
CDS Structure of MLOC_11173
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_11173.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os02g29630.1 |
+1 |
4e-35 |
103 |
47/72 (65%) |
13102.m03231 protein retrotransposon protein, putative, unclassified |
TAIR PP10 |
AT5G24690.1 |
-3 |
7e-12 |
69 |
38/69 (55%) |
Protein of unknown function (DUF3411) | chr5:8455783-8458513 REVERSE LENGTH=521 |