- Predicted Gene MLOC_11172
MLOC_11172 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 72.2905 | 52.8856 | 51.4017 | 57.139 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 34.0175 | 21.5041 | 30.8913 | 23.2124 |
| INF1 | Young developing inflorescences (5mm) | 20.7185 | 20.5028 | 19.4463 | 17.4598 |
| INF2 | Developing inflorescences (1-1.5 cm) | 16.3749 | 17.0413 | 18.1856 | 19.0943 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 59.9064 | 56.4779 | 40.5094 | 61.7313 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 49.7263 | 52.8666 | 33.7646 | 138.191 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 53.6621 | 51.5474 | 52.6415 | 52.3412 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 14.04 | 15.2452 | 14.3949 | 35.9119 |
CDS Structure of MLOC_11172
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_11172.2
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os01g42480.1 |
-1 |
8e-175 |
495 |
264/292 (90%) |
13101.m04361 protein Yip1 domain containing protein, expressed |
| TAIR PP10 |
AT5G27490.1 |
-1 |
1e-134 |
392 |
203/290 (70%) |
Integral membrane Yip1 family protein | chr5:9703130-9704653 REVERSE LENGTH=282 |