- Predicted Gene MLOC_11163
MLOC_11163 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 17.3979 | 17.791 | 18.4486 | 17.8112 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 7.26991 | 3.07493 | 2.22127 | 3.69632 |
| INF1 | Young developing inflorescences (5mm) | 26.0583 | 33.9545 | 39.7068 | 26.4159 |
| INF2 | Developing inflorescences (1-1.5 cm) | 36.1664 | 35.1106 | 36.1793 | 38.2297 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 5.9344 | 10.0109 | 11.2585 | 11.5267 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 22.6888 | 20.4904 | 27.1135 | 72.3144 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 5.40029 | 6.25868 | 5.69489 | 5.60698 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 1.26533 | 0.955147 | 1.91226 | 2.77599 |
CDS Structure of MLOC_11163
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_11163.3
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os04g48260.1 |
+3 |
1e-109 |
333 |
190/252 (75%) |
13104.m04909 protein zinc RING finger protein, putative, expressed |
| TAIR PP10 |
AT3G63530.2 |
+3 |
2e-34 |
132 |
60/108 (56%) |
| Symbols: BB, BB2 | RING/U-box superfamily protein | chr3:23456407-23457787 REVERSE LENGTH=248 |