MLOC_11141 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains10.37418.703569.620428.5966
LEAShoots from the seedlings (10 cm shoot stage)1.556350.3403580.6651040.645111
INF1Young developing inflorescences (5mm)2.087532.017381.826671.72413
INF2Developing inflorescences (1-1.5 cm)1.152181.541161.382861.54606
ROORoots from the seedlings (10 cm shoot stage)8.660925.612214.615965.63041
NODDeveloping tillers at six leaf stage, 3rd internode0.1088270.04586450.004293290.0714065
CAR5Developing grain, bracts removed (5 DPA)16.408715.67313.901615.0619
CAR15Developing grain, bracts removed (15 DPA)2.15842.380212.494915.92939



CDS Structure of MLOC_11141






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_11141.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK362668NoneNoneNoneNone
MLOC_11141.1CUST_985_PI427708080AvailableAvailablecontig_1560482 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os02g53860.1 -2 0.0 764 445/755 (59%) 13102.m06162 protein OsSub22 - Putative Subtilisin homologue, expressed
TAIR PP10 AT3G14067.1 -2 0.0 650 385/758 (51%) Subtilase family protein | chr3:4658421-4660754 REVERSE LENGTH=777