MLOC_11135 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.7890190.9296811.35861.01742
LEAShoots from the seedlings (10 cm shoot stage)243.062180.362203.48188.049
INF1Young developing inflorescences (5mm)0.02424680.02518460.03067470.0222581
INF2Developing inflorescences (1-1.5 cm)0.2746270.2149880.3397910.289339
ROORoots from the seedlings (10 cm shoot stage)0.09586120.05439790.2524950.10234
NODDeveloping tillers at six leaf stage, 3rd internode8.886127.245570.47671721.8916
CAR5Developing grain, bracts removed (5 DPA)0.07392940.06833590.0272230.0581567
CAR15Developing grain, bracts removed (15 DPA)0.02602430.02738510.07620810.104408



CDS Structure of MLOC_11135






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_11135.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK250407.1NoneNoneNoneNone
MLOC_11135.1CUST_982_PI427708080AvailableAvailablecontig_1560467 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os04g28620.1 +2 0.0 582 285/496 (57%) 13104.m02712 protein male sterility protein, putative, expressed
TAIR PP10 AT5G22500.1 +2 1e-142 428 230/485 (47%) | Symbols: FAR1 | fatty acid reductase 1 | chr5:7470541-7473916 FORWARD LENGTH=491