- Predicted Gene MLOC_11128
MLOC_11128 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_11128_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_11128_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
|
Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 0.291784 | 0.470521 | 0.162864 | 0.368447 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 0.1965 | 0.098213 | 0.228807 | 0.162287 |
INF1 | Young developing inflorescences (5mm) | 3.11002 | 3.54648 | 4.14272 | 2.80476 |
INF2 | Developing inflorescences (1-1.5 cm) | 3.52846 | 3.74829 | 3.10314 | 3.86114 |
ROO | Roots from the seedlings (10 cm shoot stage) | 0 | 0.165914 | 0.376505 | 0.303318 |
NOD | Developing tillers at six leaf stage, 3rd internode | 0.0502538 | 0.163939 | 0.362411 | 0.716573 |
CAR5 | Developing grain, bracts removed (5 DPA) | 0.250607 | 0.180207 | 0.114812 | 0.178235 |
CAR15 | Developing grain, bracts removed (15 DPA) | 0.0576261 | 0 | 0 | 0.217439 |
CDS Structure of MLOC_11128
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_11128.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os04g41490.1 |
+1 |
2e-129 |
406 |
214/270 (79%) |
13104.m04071 protein DNA-directed RNA polymerase III subunit RPC1, putative, expressed |
TAIR PP10 |
AT5G60040.1 |
+1 |
5e-77 |
259 |
141/273 (52%) |
| Symbols: NRPC1 | nuclear RNA polymerase C1 | chr5:24173590-24183269 FORWARD LENGTH=1376 |