MLOC_11126 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains53.64174.492575.64170.9078
LEAShoots from the seedlings (10 cm shoot stage)99.021241.469546.637554.7577
INF1Young developing inflorescences (5mm)101.456100.001107.6186.5305
INF2Developing inflorescences (1-1.5 cm)76.304479.307271.722282.242
ROORoots from the seedlings (10 cm shoot stage)19.778642.290436.242246.8858
NODDeveloping tillers at six leaf stage, 3rd internode42.05940.24835.6829129.035
CAR5Developing grain, bracts removed (5 DPA)47.05644.872446.927544.12
CAR15Developing grain, bracts removed (15 DPA)12.781611.398513.610628.3167



CDS Structure of MLOC_11126






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_11126.3
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK354567NoneNoneNoneNone
MLOC_11126.3CUST_979_PI427708080AvailableAvailablecontig_1560441 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os10g33720.3 +1 0.0 1142 572/614 (93%) 13110.m02978 protein methyltransferase, putative, expressed
TAIR PP10 AT1G04430.2 +1 0.0 903 434/623 (70%) S-adenosyl-L-methionine-dependent methyltransferases superfamily protein | chr1:1198860-1201301 FORWARD LENGTH=623