MLOC_11124 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains3.8408827.086321.393821.6367
LEAShoots from the seedlings (10 cm shoot stage)28.219425.013818.431822.121
INF1Young developing inflorescences (5mm)37.749634.149627.89729.4931
INF2Developing inflorescences (1-1.5 cm)40.622341.226233.054644.731
ROORoots from the seedlings (10 cm shoot stage)7.312521.915512.859325.9463
NODDeveloping tillers at six leaf stage, 3rd internode8.3442111.73338.158740.9636
CAR5Developing grain, bracts removed (5 DPA)36.669232.29335.121235.2631
CAR15Developing grain, bracts removed (15 DPA)22.602520.384521.328450.6825



CDS Structure of MLOC_11124






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_11124.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_11124.1CUST_8742_PI427708080AvailableAvailablecontig_1560435 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os03g27820.1 +3 8e-40 161 97/154 (63%) 13103.m03253 protein expressed protein
TAIR PP10 AT3G50370.1 +3 8e-81 296 443/1557 (28%) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; Has 27734 Blast hits to 16708 proteins in 1259 species: Archae - 81; Bacteria - 3434; Metazoa - 10876; Fungi - 2514; Plants - 987; Viruses - 212; Other Eukaryotes - 9630 (source: NCBI BLink). | chr3:18676436-18683863 REVERSE LENGTH=2156