MLOC_11064 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains34.282631.876133.377739.7042
LEAShoots from the seedlings (10 cm shoot stage)19.047624.688636.609925.9484
INF1Young developing inflorescences (5mm)5.778516.456574.557375.70634
INF2Developing inflorescences (1-1.5 cm)3.646444.095846.282865.97859
ROORoots from the seedlings (10 cm shoot stage)35.672135.801237.517551.0816
NODDeveloping tillers at six leaf stage, 3rd internode50.41944.758920.164131.063
CAR5Developing grain, bracts removed (5 DPA)20.619220.599719.454124.3598
CAR15Developing grain, bracts removed (15 DPA)6.946278.414467.8614422.0939



CDS Structure of MLOC_11064






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_11064.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK250050.1NoneNoneNoneNone
MLOC_11064.1CUST_976_PI427708080AvailableAvailablecontig_1560281 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os09g39440.2 -1 0.0 526 261/330 (79%) 13109.m03954 protein inosine-uridine preferring nucleoside hydrolase family protein, putative, expressed
TAIR PP10 AT2G36310.1 -1 2e-149 435 210/311 (68%) | Symbols: URH1 | uridine-ribohydrolase 1 | chr2:15224692-15226633 REVERSE LENGTH=336