- Predicted Gene MLOC_11059
MLOC_11059 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 1.40437 | 1.51761 | 1.15112 | 1.67618 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 4.46056 | 8.00294 | 19.4464 | 10.6602 |
| INF1 | Young developing inflorescences (5mm) | 0.90723 | 0.794707 | 1.02733 | 0.889473 |
| INF2 | Developing inflorescences (1-1.5 cm) | 0.702313 | 1.20043 | 1.19176 | 1.37574 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 7.11873 | 5.12922 | 3.2813 | 7.48736 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 1.75997 | 3.98917 | 3.87819 | 13.8603 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 1.47056 | 1.44292 | 1.64525 | 1.8322 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 1.14257 | 1.22349 | 0.58933 | 2.9222 |
CDS Structure of MLOC_11059
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_11059.2
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os03g07190.1 |
+1 |
7e-102 |
306 |
161/203 (79%) |
13103.m00801 protein expressed protein |
| TAIR PP10 |
AT1G13990.1 |
+1 |
2e-76 |
240 |
123/200 (62%) |
unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3110 (InterPro:IPR021503); Has 25 Blast hits to 25 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 25; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr1:4794810-4796476 FORWARD LENGTH=277 |