MLOC_11029 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains1.589081.425371.647331.41171
LEAShoots from the seedlings (10 cm shoot stage)0.6438240.56980.6326220.480088
INF1Young developing inflorescences (5mm)0.3797280.5122640.4826340.350132
INF2Developing inflorescences (1-1.5 cm)0.1986190.5866680.4640120.411385
ROORoots from the seedlings (10 cm shoot stage)1.184331.159251.396411.28267
NODDeveloping tillers at six leaf stage, 3rd internode3.543021.510140.3755353.75505
CAR5Developing grain, bracts removed (5 DPA)0.6083210.9431790.9756430.725213
CAR15Developing grain, bracts removed (15 DPA)0.284680.1862730.1533810.485233



CDS Structure of MLOC_11029






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_11029.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_11029.1CUST_8725_PI427708080AvailableAvailablecontig_1560217 (Not mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os05g47900.1 -1 5e-99 318 164/232 (71%) 13105.m05077 protein protein binding protein, putative, expressed
TAIR PP10 AT1G15020.2 +1 8e-62 169 96/162 (59%) | Symbols: ATQSOX1, QSO2, QSOX1 | quiescin-sulfhydryl oxidase 1 | chr1:5173341-5176105 REVERSE LENGTH=528