MLOC_10985 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains4.808065.02154.50263.78132
LEAShoots from the seedlings (10 cm shoot stage)3.611772.133312.943812.06098
INF1Young developing inflorescences (5mm)2.207692.096953.150641.52997
INF2Developing inflorescences (1-1.5 cm)1.756882.648081.800711.82951
ROORoots from the seedlings (10 cm shoot stage)4.086383.683763.685583.40599
NODDeveloping tillers at six leaf stage, 3rd internode1.9362.123681.986585.29542
CAR5Developing grain, bracts removed (5 DPA)2.797933.335333.183082.26443
CAR15Developing grain, bracts removed (15 DPA)1.097960.8133470.9275711.71183



CDS Structure of MLOC_10985






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_10985.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_10985.2NoneAvailableAvailablecontig_1560153 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os11g16320.1 +1 5e-26 112 54/65 (83%) 13111.m01640 protein expressed protein
TAIR PP10 AT1G65270.1 +1 1e-19 92 40/65 (62%) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endoplasmic reticulum, plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; Has 149 Blast hits to 149 proteins in 49 species: Archae - 0; Bacteria - 0; Metazoa - 98; Fungi - 0; Plants - 47; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). | chr1:24241855-24244504 FORWARD LENGTH=292