MLOC_10974 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.8011230.7905330.6689610.777774
LEAShoots from the seedlings (10 cm shoot stage)3.888667.70827.533924.98306
INF1Young developing inflorescences (5mm)0.4502440.2893040.5156850.391404
INF2Developing inflorescences (1-1.5 cm)0.3069890.2054470.24130.303406
ROORoots from the seedlings (10 cm shoot stage)1.793651.684351.031811.75368
NODDeveloping tillers at six leaf stage, 3rd internode23.240221.518322.134655.775
CAR5Developing grain, bracts removed (5 DPA)0.4057840.2574640.3104460.336778
CAR15Developing grain, bracts removed (15 DPA)0.01436320.03180320.07426250.0921078



CDS Structure of MLOC_10974






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_10974.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK371439NoneNoneNoneNone
MLOC_10974.2CUST_17892_PI427708080AvailableAvailablecontig_1560090 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os03g12620.1 -3 0.0 576 333/415 (80%) 13103.m01447 protein glycosyl hydrolases family 17, putative, expressed
TAIR PP10 AT4G34480.1 -3 2e-104 336 198/344 (58%) O-Glycosyl hydrolases family 17 protein | chr4:16481147-16483988 REVERSE LENGTH=504