MLOC_10973 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains4.731253.244623.449283.46162
LEAShoots from the seedlings (10 cm shoot stage)4.849295.292957.532134.58261
INF1Young developing inflorescences (5mm)9.871788.9235710.31157.42131
INF2Developing inflorescences (1-1.5 cm)8.5748310.478610.964510.3329
ROORoots from the seedlings (10 cm shoot stage)4.078542.70264.507573.56561
NODDeveloping tillers at six leaf stage, 3rd internode1.640272.967223.405718.39538
CAR5Developing grain, bracts removed (5 DPA)4.725054.234663.603923.79351
CAR15Developing grain, bracts removed (15 DPA)2.156781.367122.485073.93399



CDS Structure of MLOC_10973






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_10973.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_10973.1CUST_1704_PI427708083AvailableAvailablecontig_1560132 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os03g12610.2 +3 3e-61 201 102/115 (89%) 13103.m01445 protein DNA polymerase I, putative, expressed
TAIR PP10 AT3G52050.4 +3 8e-39 140 67/115 (58%) 5-3 exonuclease family protein | chr3:19305228-19309398 FORWARD LENGTH=413