MLOC_10967 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains4.200465.094784.957614.49934
LEAShoots from the seedlings (10 cm shoot stage)4.457495.224915.111413.88396
INF1Young developing inflorescences (5mm)13.658611.646810.12689.48776
INF2Developing inflorescences (1-1.5 cm)10.767911.363710.993811.3629
ROORoots from the seedlings (10 cm shoot stage)3.278686.319515.54926.2676
NODDeveloping tillers at six leaf stage, 3rd internode3.455975.242698.5156317.1189
CAR5Developing grain, bracts removed (5 DPA)5.818096.245786.823625.67735
CAR15Developing grain, bracts removed (15 DPA)1.996332.140482.079234.4413



CDS Structure of MLOC_10967






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_10967.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK362325NoneNoneNoneNone
MLOC_10967.2CUST_964_PI427708080AvailableAvailablecontig_1560116 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os06g09280.1 +3 0.0 1231 656/722 (91%) 13106.m00992 protein ATP-dependent RNA helicase, putative, expressed
TAIR PP10 AT1G26370.1 +3 0.0 876 465/713 (65%) RNA helicase family protein | chr1:9122030-9125368 REVERSE LENGTH=717