MLOC_10963 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.6870080.4759750.2540770.560471
LEAShoots from the seedlings (10 cm shoot stage)0.8433391.892831.861561.39459
INF1Young developing inflorescences (5mm)0.4910130.3391830.6647730.46773
INF2Developing inflorescences (1-1.5 cm)0.9462531.463331.513821.64835
ROORoots from the seedlings (10 cm shoot stage)2.111482.20812.788693.01942
NODDeveloping tillers at six leaf stage, 3rd internode0.4492520.6565421.032382.62193
CAR5Developing grain, bracts removed (5 DPA)4.779744.465514.320024.61079
CAR15Developing grain, bracts removed (15 DPA)3.598522.995513.059447.85403



CDS Structure of MLOC_10963






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_10963.3
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK376514NoneNoneNoneNone
MLOC_10963.3CUST_963_PI427708080AvailableAvailablecontig_1560099 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os03g17550.1 +3 7e-147 430 208/300 (69%) 13103.m02095 protein serine/threonine-protein kinase, putative, expressed
TAIR PP10 AT5G18610.2 +3 4e-124 375 190/317 (60%) Protein kinase superfamily protein | chr5:6192736-6195371 FORWARD LENGTH=513