MLOC_10957 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains3.051993.606861.859183.48749
LEAShoots from the seedlings (10 cm shoot stage)125.469406.608456.345308.658
INF1Young developing inflorescences (5mm)6.275675.0099610.67797.2767
INF2Developing inflorescences (1-1.5 cm)11.21077.1568615.694413.0476
ROORoots from the seedlings (10 cm shoot stage)16.316219.239422.010525.6842
NODDeveloping tillers at six leaf stage, 3rd internode82.7065124.176224.703465.139
CAR5Developing grain, bracts removed (5 DPA)15.163218.45317.397419.3681
CAR15Developing grain, bracts removed (15 DPA)32.214435.340125.33184.6707



CDS Structure of MLOC_10957






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_10957.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK251025.1NoneNoneNoneNone
MLOC_10957.1CUST_17891_PI427708080AvailableAvailablecontig_1560090 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os02g57280.1 +2 2e-84 263 157/221 (71%) 13102.m06592 protein CBS domain containing membrane protein, putative, expressed
TAIR PP10None-----