MLOC_10933 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains15.968118.004616.168318.672
LEAShoots from the seedlings (10 cm shoot stage)19.935825.096525.379321.6775
INF1Young developing inflorescences (5mm)24.371526.36526.885523.5388
INF2Developing inflorescences (1-1.5 cm)16.227319.712914.520120.1587
ROORoots from the seedlings (10 cm shoot stage)16.196320.995517.328926.5529
NODDeveloping tillers at six leaf stage, 3rd internode10.397410.81318.281642.1302
CAR5Developing grain, bracts removed (5 DPA)15.287616.107216.896316.773
CAR15Developing grain, bracts removed (15 DPA)6.972656.350045.129615.478



CDS Structure of MLOC_10933






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_10933.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK358379NoneNoneNoneNone
MLOC_10933.1CUST_957_PI427708080AvailableAvailablecontig_1560054 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os05g45590.1 +2 0.0 810 410/469 (87%) 13105.m04843 protein hexokinase, putative, expressed
TAIR PP10 AT4G29130.1 +2 0.0 680 341/468 (73%) | Symbols: ATHXK1, GIN2, HXK1 | hexokinase 1 | chr4:14352338-14354865 REVERSE LENGTH=496