MLOC_10924 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains4.964154.536055.524055.8655
LEAShoots from the seedlings (10 cm shoot stage)5.113723.077596.812795.6874
INF1Young developing inflorescences (5mm)3.78044.169796.228034.58073
INF2Developing inflorescences (1-1.5 cm)4.140094.268674.606915.64668
ROORoots from the seedlings (10 cm shoot stage)4.676815.963785.169888.66284
NODDeveloping tillers at six leaf stage, 3rd internode5.944047.897288.4839433.3274
CAR5Developing grain, bracts removed (5 DPA)3.197683.044943.081183.58142
CAR15Developing grain, bracts removed (15 DPA)2.052492.179242.832475.62919



CDS Structure of MLOC_10924






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_10924.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_10924.2CUST_11327_PI427708083AvailableAvailablecontig_1560043 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os03g12300.2 +2 3e-49 180 106/128 (83%) 13103.m01403 protein HEAT repeat family protein, putative, expressed
TAIR PP10 AT2G01690.1 +2 7e-17 84 65/134 (49%) ARM repeat superfamily protein | chr2:309144-313499 REVERSE LENGTH=743