MLOC_10922 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains8.409786.643896.565536.51515
LEAShoots from the seedlings (10 cm shoot stage)8.482755.536486.528935.33848
INF1Young developing inflorescences (5mm)11.775411.451813.40949.08481
INF2Developing inflorescences (1-1.5 cm)11.001310.266613.555710.9749
ROORoots from the seedlings (10 cm shoot stage)8.149717.8331510.17888.39071
NODDeveloping tillers at six leaf stage, 3rd internode8.170375.37127.334115.6877
CAR5Developing grain, bracts removed (5 DPA)10.86589.6713611.86449.12115
CAR15Developing grain, bracts removed (15 DPA)9.546518.301888.0056218.3759



CDS Structure of MLOC_10922






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_10922.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK361706NoneNoneNoneNone
MLOC_10922.1CUST_955_PI427708080AvailableAvailablecontig_1560042 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os02g55300.1 -1 0.0 541 270/295 (92%) 13102.m06339 protein CAF1 family ribonuclease containing protein, putative, expressed
TAIR PP10 AT2G32070.1 -1 1e-133 410 191/269 (71%) Polynucleotidyl transferase, ribonuclease H-like superfamily protein | chr2:13640829-13641656 REVERSE LENGTH=275