- Predicted Gene MLOC_10909
MLOC_10909 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 0.840827 | 1.41653 | 0.843653 | 1.02744 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 1.3837 | 1.24689 | 1.24437 | 1.06269 |
| INF1 | Young developing inflorescences (5mm) | 1.92376 | 1.9351 | 2.32501 | 1.51795 |
| INF2 | Developing inflorescences (1-1.5 cm) | 2.18418 | 2.03623 | 2.16736 | 2.04933 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 0.580696 | 1.30705 | 1.40471 | 1.3145 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 0.875941 | 0.788158 | 1.49072 | 2.99123 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 1.18947 | 1.11028 | 1.23353 | 0.98455 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 0.874716 | 1.25547 | 0.884465 | 1.99527 |
CDS Structure of MLOC_10909
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_10909.2
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os03g52594.5 |
+3 |
1e-73 |
198 |
134/178 (75%) |
13103.m05729 protein CCR4-NOT transcription factor, putative, expressed |
| TAIR PP10 |
AT5G59710.1 |
+3 |
6e-40 |
107 |
99/178 (56%) |
| Symbols: VIP2, AtVIP2 | VIRE2 interacting protein 2 | chr5:24058157-24061736 FORWARD LENGTH=614 |