MLOC_10893 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains18.69713.437616.096614.0946
LEAShoots from the seedlings (10 cm shoot stage)39.515415.978736.813322.9327
INF1Young developing inflorescences (5mm)0.286930.1848670.07800970.160129
INF2Developing inflorescences (1-1.5 cm)0.1921690.1570850.1147150.175093
ROORoots from the seedlings (10 cm shoot stage)90.31446.841870.028453.5835
NODDeveloping tillers at six leaf stage, 3rd internode96.7774149.95222.8552268.023
CAR5Developing grain, bracts removed (5 DPA)63.808972.962356.286459.2294
CAR15Developing grain, bracts removed (15 DPA)29.71731.208522.096968.8466



CDS Structure of MLOC_10893






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_10893.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK366877NoneNoneNoneNone
MLOC_10893.1CUST_950_PI427708080AvailableAvailablecontig_1559996 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os03g25440.1 +1 6e-104 313 174/194 (90%) 13103.m03001 protein expressed protein
TAIR PP10 AT3G21550.1 +1 2e-45 159 89/178 (50%) | Symbols: DMP2, AtDMP2 | DUF679 domain membrane protein 2 | chr3:7591708-7592262 REVERSE LENGTH=184