- Predicted Gene MLOC_10892
MLOC_10892 FPKM values
| FPKM by Treatment | FPKM by Replicate |
|---|
| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 10.732 | 14.0231 | 11.8493 | 13.8079 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 8.45097 | 5.51403 | 6.92838 | 6.23206 |
| INF1 | Young developing inflorescences (5mm) | 10.3025 | 9.07114 | 8.59137 | 8.22746 |
| INF2 | Developing inflorescences (1-1.5 cm) | 11.5804 | 11.3336 | 13.0655 | 13.5336 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 5.52523 | 12.7774 | 12.4508 | 15.2795 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 5.73395 | 4.8781 | 2.33056 | 15.6661 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 15.672 | 17.4655 | 16.6608 | 17.2709 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 4.6777 | 5.05097 | 4.80434 | 11.8208 |
CDS Structure of MLOC_10892
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_10892.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os12g06490.1 |
-2 |
0.0 |
554 |
288/401 (72%) |
13112.m00663 protein STE_PAK_Ste20_Slob_Wnk.6 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed |
| TAIR PP10 |
AT3G48260.1 |
-2 |
9e-117 |
362 |
194/392 (49%) |
| Symbols: WNK3 | with no lysine (K) kinase 3 | chr3:17873012-17875220 REVERSE LENGTH=516 |
