MLOC_1089 FPKM values

FPKM by TreatmentFPKM by Replicate
There are no FPKM-by-treatment values calculated for this gene.


Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains1.239584.289593.22740
LEAShoots from the seedlings (10 cm shoot stage)7.32577.847431.678140
INF1Young developing inflorescences (5mm)3.982394.950112.498090
INF2Developing inflorescences (1-1.5 cm)4.775226.694232.59710
ROORoots from the seedlings (10 cm shoot stage)2.042454.201033.491290
NODDeveloping tillers at six leaf stage, 3rd internode4.763717.400166.193840
CAR5Developing grain, bracts removed (5 DPA)1.19315.086691.089010
CAR15Developing grain, bracts removed (15 DPA)2.685440.97313400



CDS Structure of MLOC_1089






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK354022
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK354022CUST_23646_PI427708080NoneNoneNone
MLOC_1089.1NoneAvailableNonecontig_109193 (Not mapped)
MLOC_32070.1NoneAvailableNonecontig_2249708 (Not mapped)
MLOC_32324.1NoneAvailableNonecontig_2276088 (Not mapped)
MLOC_57522.1NoneAvailableAvailablecontig_418290 (Not mapped)
MLOC_77737.1NoneAvailableNonecontig_770463 (Not mapped)
MLOC_79394.2NoneAvailableNonecontig_84824 (Mapped)
MLOC_80241.1NoneAvailableNonecontig_894158 (Not mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----