MLOC_10884 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains1.987052.965563.005442.59984
LEAShoots from the seedlings (10 cm shoot stage)3.666488.3653115.63447.98674
INF1Young developing inflorescences (5mm)0.9817111.512521.712491.06081
INF2Developing inflorescences (1-1.5 cm)1.502721.610642.534141.82142
ROORoots from the seedlings (10 cm shoot stage)7.768548.274527.685939.94478
NODDeveloping tillers at six leaf stage, 3rd internode0.8129541.013021.472713.91724
CAR5Developing grain, bracts removed (5 DPA)1.932242.162692.85572.08353
CAR15Developing grain, bracts removed (15 DPA)0.4937190.6596420.3643761.10182



CDS Structure of MLOC_10884






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_10884.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_10884.2CUST_8708_PI427708080AvailableAvailablecontig_1559984 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os06g47530.1 +3 1e-159 469 257/398 (65%) 13106.m05043 protein TKL_IRAK_DUF26-lh.6 - DUF26 kinases have homology to DUF26 containing loci, expressed
TAIR PP10 AT4G23280.1 +3 3e-94 303 156/331 (47%) | Symbols: CRK20 | cysteine-rich RLK (RECEPTOR-like protein kinase) 20 | chr4:12174740-12177471 FORWARD LENGTH=656