MLOC_10881 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0000
LEAShoots from the seedlings (10 cm shoot stage)0.4782881.37532.465721.22818
INF1Young developing inflorescences (5mm)0000
INF2Developing inflorescences (1-1.5 cm)0.0585091000.071655
ROORoots from the seedlings (10 cm shoot stage)0000
NODDeveloping tillers at six leaf stage, 3rd internode0.3294770.3753610.5181621.13237
CAR5Developing grain, bracts removed (5 DPA)0.068003600.07023760.127293
CAR15Developing grain, bracts removed (15 DPA)0.05689180.063955500.205759



CDS Structure of MLOC_10881






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_10881.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_10881.1CUST_1692_PI427708083AvailableAvailablecontig_1559975 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os11g14270.1 +2 4e-26 109 56/129 (43%) 13111.m01462 protein transposon protein, putative, unclassified
TAIR PP10 AT1G19260.1 +2 6e-11 62 35/107 (33%) TTF-type zinc finger protein with HAT dimerisation domain | chr1:6657260-6659569 REVERSE LENGTH=769