- Predicted Gene MLOC_10876
MLOC_10876 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_10876_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_10876_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 1.15838 | 0.975331 | 1.39671 | 1.11378 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 15.5845 | 3.82669 | 6.55818 | 7.83988 |
INF1 | Young developing inflorescences (5mm) | 0.531622 | 0.796383 | 0.724175 | 0.55333 |
INF2 | Developing inflorescences (1-1.5 cm) | 1.05172 | 0.503114 | 0.308915 | 0.695222 |
ROO | Roots from the seedlings (10 cm shoot stage) | 6.47899 | 4.4493 | 18.7827 | 7.37909 |
NOD | Developing tillers at six leaf stage, 3rd internode | 383.544 | 355.125 | 35.7127 | 1042.05 |
CAR5 | Developing grain, bracts removed (5 DPA) | 1299.73 | 1134.4 | 1209.04 | 1137.7 |
CAR15 | Developing grain, bracts removed (15 DPA) | 2.67766 | 2.82762 | 3.87703 | 6.42436 |
CDS Structure of MLOC_10876
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_10876.2
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os11g03780.2 |
-1 |
0.0 |
1014 |
491/622 (79%) |
13111.m00322 protein alpha-N-arabinofuranosidase, putative, expressed |
TAIR PP10 |
AT3G10740.1 |
-1 |
0.0 |
772 |
387/615 (63%) |
| Symbols: ASD1, ARAF1, ARAF, ATASD1 | alpha-L-arabinofuranosidase 1 | chr3:3361031-3364573 REVERSE LENGTH=678 |