- Predicted Gene MLOC_10874
MLOC_10874 FPKM values
FPKM by Treatment | FPKM by Replicate |
|
|
Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 0.320907 | 0.496049 | 0.306707 | 0.427241 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 8.61966 | 2.47444 | 2.20893 | 3.95902 |
INF1 | Young developing inflorescences (5mm) | 0.123462 | 0.0672253 | 0.0782882 | 0.0806786 |
INF2 | Developing inflorescences (1-1.5 cm) | 0.938217 | 1.93917 | 3.51947 | 2.20238 |
ROO | Roots from the seedlings (10 cm shoot stage) | 0.142576 | 0.535227 | 0.207756 | 0.593708 |
NOD | Developing tillers at six leaf stage, 3rd internode | 0 | 0 | 0 | 0 |
CAR5 | Developing grain, bracts removed (5 DPA) | 0 | 0 | 0 | 0 |
CAR15 | Developing grain, bracts removed (15 DPA) | 0 | 0 | 0 | 0 |
CDS Structure of MLOC_10874
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_10874.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os12g16650.1 |
-3 |
3e-46 |
166 |
105/190 (55%) |
13112.m01765 protein Cyclopropane-fatty-acyl-phospholipid synthase, putative, expressed |
TAIR PP10 |
AT3G23530.1 |
-3 |
3e-55 |
191 |
127/230 (55%) |
Cyclopropane-fatty-acyl-phospholipid synthase | chr3:8437472-8442597 FORWARD LENGTH=867 |