MLOC_10874 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.3209070.4960490.3067070.427241
LEAShoots from the seedlings (10 cm shoot stage)8.619662.474442.208933.95902
INF1Young developing inflorescences (5mm)0.1234620.06722530.07828820.0806786
INF2Developing inflorescences (1-1.5 cm)0.9382171.939173.519472.20238
ROORoots from the seedlings (10 cm shoot stage)0.1425760.5352270.2077560.593708
NODDeveloping tillers at six leaf stage, 3rd internode0000
CAR5Developing grain, bracts removed (5 DPA)0000
CAR15Developing grain, bracts removed (15 DPA)0000



CDS Structure of MLOC_10874






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_10874.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_10874.1CUST_1689_PI427708083AvailableAvailablecontig_1559965 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os12g16650.1 -3 3e-46 166 105/190 (55%) 13112.m01765 protein Cyclopropane-fatty-acyl-phospholipid synthase, putative, expressed
TAIR PP10 AT3G23530.1 -3 3e-55 191 127/230 (55%) Cyclopropane-fatty-acyl-phospholipid synthase | chr3:8437472-8442597 FORWARD LENGTH=867