- Predicted Gene MLOC_10873
MLOC_10873 FPKM values
FPKM by Treatment | FPKM by Replicate |
|
|
Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 2.09411 | 2.93524 | 2.36134 | 2.44419 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 8.82365 | 1.60823 | 2.45013 | 3.84196 |
INF1 | Young developing inflorescences (5mm) | 1.16991 | 1.31067 | 2.36646 | 1.18504 |
INF2 | Developing inflorescences (1-1.5 cm) | 2.03566 | 4.15158 | 4.94305 | 3.50594 |
ROO | Roots from the seedlings (10 cm shoot stage) | 0.44388 | 1.96762 | 1.45858 | 1.87119 |
NOD | Developing tillers at six leaf stage, 3rd internode | 0 | 0.00990371 | 0.0152567 | 0.0504996 |
CAR5 | Developing grain, bracts removed (5 DPA) | 0.0257561 | 0.02344 | 0 | 0.0245296 |
CAR15 | Developing grain, bracts removed (15 DPA) | 0.0872882 | 0.0296906 | 0.128141 | 0.15284 |
CDS Structure of MLOC_10873
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_10873.2
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os12g16650.2 |
-3 |
0.0 |
822 |
418/597 (70%) |
13112.m01766 protein Cyclopropane-fatty-acyl-phospholipid synthase, putative, expressed |
TAIR PP10 |
AT3G23510.1 |
-3 |
0.0 |
710 |
363/592 (61%) |
Cyclopropane-fatty-acyl-phospholipid synthase | chr3:8428071-8433159 FORWARD LENGTH=867 |