MLOC_10873 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains2.094112.935242.361342.44419
LEAShoots from the seedlings (10 cm shoot stage)8.823651.608232.450133.84196
INF1Young developing inflorescences (5mm)1.169911.310672.366461.18504
INF2Developing inflorescences (1-1.5 cm)2.035664.151584.943053.50594
ROORoots from the seedlings (10 cm shoot stage)0.443881.967621.458581.87119
NODDeveloping tillers at six leaf stage, 3rd internode00.009903710.01525670.0504996
CAR5Developing grain, bracts removed (5 DPA)0.02575610.0234400.0245296
CAR15Developing grain, bracts removed (15 DPA)0.08728820.02969060.1281410.15284



CDS Structure of MLOC_10873






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_10873.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK373730NoneNoneNoneNone
MLOC_10873.2CUST_946_PI427708080AvailableAvailablecontig_1559965 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os12g16650.2 -3 0.0 822 418/597 (70%) 13112.m01766 protein Cyclopropane-fatty-acyl-phospholipid synthase, putative, expressed
TAIR PP10 AT3G23510.1 -3 0.0 710 363/592 (61%) Cyclopropane-fatty-acyl-phospholipid synthase | chr3:8428071-8433159 FORWARD LENGTH=867