- Predicted Gene MLOC_10860
MLOC_10860 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_10860_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_10860_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
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EMB | 4-day embryos dissected from germinating grains | 0.473743 | 0.323818 | 0.53644 | 0.451107 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 0.172612 | 0.669403 | 0 | 0.377565 |
INF1 | Young developing inflorescences (5mm) | 2.61066 | 2.84482 | 4.07637 | 3.01524 |
INF2 | Developing inflorescences (1-1.5 cm) | 7.88699 | 5.84032 | 6.57492 | 8.09049 |
ROO | Roots from the seedlings (10 cm shoot stage) | 1.45156 | 1.06899 | 1.98929 | 1.51549 |
NOD | Developing tillers at six leaf stage, 3rd internode | 1.47375 | 2.10136 | 0.548049 | 5.11722 |
CAR5 | Developing grain, bracts removed (5 DPA) | 0.0725052 | 0.0339078 | 0.0354425 | 0.049709 |
CAR15 | Developing grain, bracts removed (15 DPA) | 0.0532226 | 0 | 0.0385798 | 0.120051 |
CDS Structure of MLOC_10860
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_10860.3
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os12g39100.1 |
-3 |
2e-24 |
101 |
91/205 (44%) |
13112.m04043 protein expressed protein |
TAIR PP10 |
AT5G67390.2 |
-3 |
7e-11 |
61 |
28/42 (67%) |
unknown protein; BEST Arabidopsis thaliana protein match is: Plant protein of unknown function (DUF863) (TAIR:AT1G69360.1); Has 186 Blast hits to 186 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 170; Viruses - 0; Other Eukaryotes - 16 (source: NCBI BLink). | chr5:26887883-26888512 REVERSE LENGTH=176 |