- Predicted Gene MLOC_10859
MLOC_10859 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_10859_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
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EMB | 4-day embryos dissected from germinating grains | 2.76461 | 4.94752 | 3.92605 | 4.7759 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 2.5977 | 0.494694 | 0.511033 | 1.18473 |
INF1 | Young developing inflorescences (5mm) | 21.0907 | 21.339 | 18.1143 | 18.8686 |
INF2 | Developing inflorescences (1-1.5 cm) | 18.3677 | 21.9118 | 17.0918 | 24.4492 |
ROO | Roots from the seedlings (10 cm shoot stage) | 0.241648 | 1.82106 | 2.41841 | 2.74392 |
NOD | Developing tillers at six leaf stage, 3rd internode | 0.124504 | 0.124607 | 0.192549 | 0.650333 |
CAR5 | Developing grain, bracts removed (5 DPA) | 4.43715 | 4.3488 | 5.33588 | 5.29997 |
CAR15 | Developing grain, bracts removed (15 DPA) | 0.682929 | 0.384432 | 0.704939 | 1.41781 |
CDS Structure of MLOC_10859
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_10859.4
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os03g40780.1 |
+1 |
0.0 |
834 |
531/855 (62%) |
13103.m04399 protein transport protein-related, putative, expressed |
TAIR PP10 |
AT1G49870.2 |
+1 |
2e-84 |
291 |
286/831 (34%) |
unknown protein; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). | chr1:18460911-18463557 FORWARD LENGTH=790 |