MLOC_10859 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains2.764614.947523.926054.7759
LEAShoots from the seedlings (10 cm shoot stage)2.59770.4946940.5110331.18473
INF1Young developing inflorescences (5mm)21.090721.33918.114318.8686
INF2Developing inflorescences (1-1.5 cm)18.367721.911817.091824.4492
ROORoots from the seedlings (10 cm shoot stage)0.2416481.821062.418412.74392
NODDeveloping tillers at six leaf stage, 3rd internode0.1245040.1246070.1925490.650333
CAR5Developing grain, bracts removed (5 DPA)4.437154.34885.335885.29997
CAR15Developing grain, bracts removed (15 DPA)0.6829290.3844320.7049391.41781



CDS Structure of MLOC_10859






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_10859.4
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_10859.4CUST_8705_PI427708080AvailableAvailablecontig_1559944 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os03g40780.1 +1 0.0 834 531/855 (62%) 13103.m04399 protein transport protein-related, putative, expressed
TAIR PP10 AT1G49870.2 +1 2e-84 291 286/831 (34%) unknown protein; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). | chr1:18460911-18463557 FORWARD LENGTH=790