MLOC_10856 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains169.373202.619195.967214.389
LEAShoots from the seedlings (10 cm shoot stage)79.371255.752949.855757.7758
INF1Young developing inflorescences (5mm)57.334554.359246.822249.4937
INF2Developing inflorescences (1-1.5 cm)47.663652.385441.051757.6804
ROORoots from the seedlings (10 cm shoot stage)103.964123.46695.9156164.09
NODDeveloping tillers at six leaf stage, 3rd internode74.825862.230739.8552230.102
CAR5Developing grain, bracts removed (5 DPA)106.046107.846108.2116.986
CAR15Developing grain, bracts removed (15 DPA)21.602422.507920.755955.8946



CDS Structure of MLOC_10856






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_10856.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK251209.1NoneNoneNoneNone
MLOC_10856.1CUST_944_PI427708080AvailableAvailablecontig_1559938 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os05g06750.1 -3 0.0 862 464/504 (92%) 13105.m00730 protein dihydrolipoyl dehydrogenase, mitochondrial precursor, putative, expressed
TAIR PP10 AT1G48030.2 -3 0.0 759 387/477 (81%) | Symbols: mtLPD1 | mitochondrial lipoamide dehydrogenase 1 | chr1:17717432-17719141 REVERSE LENGTH=507