MLOC_10855 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains54.611856.038256.391659.3002
LEAShoots from the seedlings (10 cm shoot stage)86.146828.205938.743842.5842
INF1Young developing inflorescences (5mm)26.073123.165525.366522.9524
INF2Developing inflorescences (1-1.5 cm)74.907373.977680.840587.2787
ROORoots from the seedlings (10 cm shoot stage)110.95979.353798.3374100.687
NODDeveloping tillers at six leaf stage, 3rd internode319.735359.76749.1112838.74
CAR5Developing grain, bracts removed (5 DPA)262.238267.111245.01268.788
CAR15Developing grain, bracts removed (15 DPA)104.18279.072389.2614229.589



CDS Structure of MLOC_10855






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_10855.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK360427NoneNoneNoneNone
MLOC_10855.1CUST_943_PI427708080AvailableAvailablecontig_1559936 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os02g44630.2 -2 0.0 549 277/290 (96%) 13102.m04992 protein aquaporin protein, putative, expressed
TAIR PP10 AT4G23400.1 -2 2e-178 505 252/285 (88%) | Symbols: PIP1D, PIP1;5 | plasma membrane intrinsic protein 1;5 | chr4:12220792-12222155 FORWARD LENGTH=287