MLOC_10830 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains4.524632.877852.753393.07949
LEAShoots from the seedlings (10 cm shoot stage)2.366521.272181.332941.35975
INF1Young developing inflorescences (5mm)6.692687.250168.921115.60205
INF2Developing inflorescences (1-1.5 cm)7.224145.783877.215226.49567
ROORoots from the seedlings (10 cm shoot stage)3.740092.399252.904352.95328
NODDeveloping tillers at six leaf stage, 3rd internode0.5934250.7541112.698363.08108
CAR5Developing grain, bracts removed (5 DPA)2.804752.599673.472252.53471
CAR15Developing grain, bracts removed (15 DPA)1.049460.8670321.321872.13895



CDS Structure of MLOC_10830






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_10830.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_10830.2CUST_11323_PI427708083AvailableAvailablecontig_1559874 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os01g56460.1 +1 2e-25 108 49/57 (86%) 13101.m05974 protein mitochondrial glycoprotein, putative, expressed
TAIR PP10 AT4G32605.1 +1 2e-20 92 40/52 (77%) Mitochondrial glycoprotein family protein | chr4:15726429-15727864 REVERSE LENGTH=227