MLOC_10793 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.1164550.2432010.2783880.193322
LEAShoots from the seedlings (10 cm shoot stage)0.6939081.938653.315541.4867
INF1Young developing inflorescences (5mm)0.4252510.109550.3438070.223587
INF2Developing inflorescences (1-1.5 cm)1.734071.201561.546191.45844
ROORoots from the seedlings (10 cm shoot stage)0.9363830.6743370.1058940.736368
NODDeveloping tillers at six leaf stage, 3rd internode0.01424150.07226090.05268690.206682
CAR5Developing grain, bracts removed (5 DPA)1.173311.00231.291070.982103
CAR15Developing grain, bracts removed (15 DPA)0.2294690.3416760.2639080.554038



CDS Structure of MLOC_10793






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_10793.6
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK369273NoneNoneNoneNone
MLOC_10793.6CUST_17885_PI427708080AvailableAvailablecontig_1559537 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os02g13780.1 +2 0.0 1172 685/1054 (65%) 13102.m01532 protein receptor-like protein kinase 2 precursor, putative
TAIR PP10 AT3G47570.1 +2 0.0 612 394/944 (42%) Leucine-rich repeat protein kinase family protein | chr3:17527611-17530748 FORWARD LENGTH=1010