MLOC_10790 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains3.400024.179144.104422.77402
LEAShoots from the seedlings (10 cm shoot stage)5.195958.540864.459533.63601
INF1Young developing inflorescences (5mm)7.868626.081459.086274.34699
INF2Developing inflorescences (1-1.5 cm)13.337510.119410.76399.22196
ROORoots from the seedlings (10 cm shoot stage)1.597673.260041.214332.28434
NODDeveloping tillers at six leaf stage, 3rd internode2.808783.139445.007678.33413
CAR5Developing grain, bracts removed (5 DPA)5.440365.846927.545954.09016
CAR15Developing grain, bracts removed (15 DPA)4.680182.723115.354736.43652



CDS Structure of MLOC_10790






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_10790.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_10790.1NoneAvailableAvailablecontig_1559778 (Not mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10 AT5G37590.1 -1 9e-17 80 39/69 (57%) Tetratricopeptide repeat (TPR)-like superfamily protein | chr5:14927403-14932709 REVERSE LENGTH=551