MLOC_10766 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains25.354123.346216.984621.5544
LEAShoots from the seedlings (10 cm shoot stage)23.67576.5859513.898211.9113
INF1Young developing inflorescences (5mm)11.94384.026926.501986.39526
INF2Developing inflorescences (1-1.5 cm)17.788936.654339.292933.2217
ROORoots from the seedlings (10 cm shoot stage)2.245924.72197.989135.10558
NODDeveloping tillers at six leaf stage, 3rd internode4.208972.8174.282598.03122
CAR5Developing grain, bracts removed (5 DPA)486.902560.31509.96501.772
CAR15Developing grain, bracts removed (15 DPA)1.88881.129975.822716.13926



CDS Structure of MLOC_10766






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_10766.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK250501.1NoneNoneNoneNone
MLOC_10766.1CUST_930_PI427708080AvailableAvailablecontig_1559746 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os02g41904.1 -3 9e-23 92 42/63 (67%) 13102.m04631 protein DEF7 - Defensin and Defensin-like DEFL family
TAIR PP10 AT2G02100.1 -3 2e-14 68 34/63 (54%) | Symbols: LCR69, PDF2.2 | low-molecular-weight cysteine-rich 69 | chr2:528397-528885 FORWARD LENGTH=77