- Predicted Gene MLOC_10712
MLOC_10712 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_10712_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_10712_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
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EMB | 4-day embryos dissected from germinating grains | 2.79368 | 4.04571 | 3.61547 | 2.83789 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 7.69076 | 6.16987 | 4.82071 | 4.47564 |
INF1 | Young developing inflorescences (5mm) | 6.40547 | 5.65295 | 4.92777 | 3.85339 |
INF2 | Developing inflorescences (1-1.5 cm) | 7.76893 | 6.02134 | 7.25774 | 6.07206 |
ROO | Roots from the seedlings (10 cm shoot stage) | 4.34449 | 3.86595 | 4.86321 | 3.79748 |
NOD | Developing tillers at six leaf stage, 3rd internode | 0.823481 | 1.16249 | 1.67691 | 3.49165 |
CAR5 | Developing grain, bracts removed (5 DPA) | 10.205 | 9.50302 | 9.807 | 7.24617 |
CAR15 | Developing grain, bracts removed (15 DPA) | 5.98279 | 6.28248 | 6.37058 | 10.6154 |
CDS Structure of MLOC_10712
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_10712.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os08g01040.1 |
+2 |
2e-99 |
328 |
235/513 (46%) |
13108.m00004 protein zinc finger, C3HC4 type domain containing protein, expressed |
TAIR PP10 |
AT4G34100.1 |
+2 |
3e-50 |
192 |
189/616 (31%) |
RING/U-box superfamily protein | chr4:16330590-16334864 FORWARD LENGTH=1108 |