MLOC_10698 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0000
LEAShoots from the seedlings (10 cm shoot stage)0.62471600.09303410.19951
INF1Young developing inflorescences (5mm)0.0803636000.0331548
INF2Developing inflorescences (1-1.5 cm)0.1156380.18316300.132047
ROORoots from the seedlings (10 cm shoot stage)0.3591410.5185220.7370970.612988
NODDeveloping tillers at six leaf stage, 3rd internode0.05438510.01454330.04980630.072965
CAR5Developing grain, bracts removed (5 DPA)0.143363000.0418826
CAR15Developing grain, bracts removed (15 DPA)0.1343640.0870770.2127310.260987



CDS Structure of MLOC_10698






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_10698.5
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_10698.5CUST_8674_PI427708080AvailableAvailablecontig_1559610 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os04g39180.1 -1 3e-142 414 200/263 (76%) 13104.m03786 protein nodulation receptor kinase precursor, putative
TAIR PP10 AT5G07280.1 -1 4e-41 155 93/205 (45%) | Symbols: EMS1, EXS | Leucine-rich repeat transmembrane protein kinase | chr5:2285088-2288666 FORWARD LENGTH=1192